[R-br] [Dúvida] Problema na instalação: rgdal

Pedro Rafael pedro.rafael.marinho em gmail.com
Terça Fevereiro 14 17:15:38 BRST 2012


Atualizei o sistema e instalei todas os pacotes que refere-se a gdal mesmo
sabendo que alguns não teria muito haver com o problema. Os pacotes foram:

root em tulio-dplan:/home/tulio/Área de trabalho/gdal-1.9.0# apt-cache search
gdal
dans-gdal-scripts - Ferramentas contribuídas de GDAL da Rede de Informação
Geográfica do Alaska
gdal-bin - Biblioteca de abstracção de dados geoespaciais - programas
utilitários
libgdal-doc - Documentação para a biblioteca Geospatial Data Abstraction
Library
libgdal-perl - Perl bindings to the Geospatial Data Abstraction Library
libgdal-ruby - vínculos Ruby para a biblioteca de abstração de dados
geoespaciais
libgdal-ruby1.8 - Ruby 1.8 bindings to the Geospatial Data Abstraction
Library
libgdal1-1.7.0-grass - Extensão GRASS para a biblioteca GDAL
libgdal1-dev - Geospatial Data Abstraction Library - Development files
python-gdal - Python bindings to the Geospatial Data Abstraction Library
qlandkartegt - Mapeamento GPS (GeoTiff e vectorial) e gestão de GPSr
libgdal1-1.7.0 - Geospatial Data Abstraction Library


Após atualizar o sistema e instalar essas bibliotecas o R reclama de umas
bibliotecas de C++ que são:

checking proj_api.h usability... no
checking proj_api.h presence... no
checking for proj_api.h... no
Error: proj_api.h not found.

Ver o erro abaixo:

> install.packages("rgdal")
Installing package(s) into ‘/usr/local/lib/R/site-library’
(as ‘lib’ is unspecified)
tentando a URL '
http://www.vps.fmvz.usp.br/CRAN/src/contrib/rgdal_0.7-8.tar.gz'
Content type 'application/x-gzip' length 1427851 bytes (1.4 Mb)
URL aberta
==================================================
downloaded 1.4 Mb

* installing *source* package ‘rgdal’ ...
** package ‘rgdal’ successfully unpacked and MD5 sums checked
gdal-config: gdal-config
checking for gcc... gcc -std=gnu99
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc -std=gnu99 accepts -g... yes
checking for gcc -std=gnu99 option to accept ISO C89... none needed
checking how to run the C preprocessor... gcc -std=gnu99 -E
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking proj_api.h usability... no
checking proj_api.h presence... no
checking for proj_api.h... no
Error: proj_api.h not found.
If the PROJ.4 library is installed in a non-standard location,
use --configure-args='--with-proj-include=/opt/local/include'
for example, replacing /opt/local/* with appropriate values
for your installation. If PROJ.4 is not installed, install it.
ERROR: configuration failed for package ‘rgdal’
* removing ‘/usr/local/lib/R/site-library/rgdal’

The downloaded packages are in
‘/tmp/Rtmpae07aZ/downloaded_packages’
Mensagens de aviso perdidas:
In install.packages("rgdal") :
  installation of package ‘rgdal’ had non-zero exit status


Em 14 de fevereiro de 2012 16:10, Leonard de Assis [via R-br] <
ml-node+s2285057n4388170h47 em n4.nabble.com> escreveu:

> deve existir uma libgdal...-dev, essas libs fazem a diferença na hora de
> achar referencias quebradas
>
> []s
> Leonard de Assis
> assis <dot> leonard <at> gmail <dot> com
>
>
> Em 14/02/2012 16:56, Pedro Rafael escreveu:
>
> Mas desde o primeiro programa o gdal tá instalado. Estou no Ubuntu 11.10.
>
>  root em tulio-dplan:/home/tulio/Área de trabalho/gdal-1.9.0# apt-get
> install gdal-bin
> Lendo listas de pacotes... Pronto
> Construindo árvore de dependências
> Lendo informação de estado... Pronto
> gdal-bin já é a versão mais nova.
> 0 pacotes atualizados, 0 pacotes novos instalados, 0 a serem removidos e
> 17 não atualizados.
>
>
>
>
> Em 14 de fevereiro de 2012 15:48, Daniel C Bezerra [via R-br] <[hidden
> email] <http://user/SendEmail.jtp?type=node&node=4388170&i=0>> escreveu:
>
>  Se vc estiver usando Ubuntu gdal está disponível nos repositórios. O
>> problema é que só vai funcionar se vc estiver rodando a última versão do
>> Ubuntu (11.10). Para versões anteriores vc tem que baixar do site mesmo.
>>
>> Abs,
>>
>> D
>>
>> 2012/2/14 Benilton Carvalho <[hidden email]<http://user/SendEmail.jtp?type=node&node=4388079&i=0>
>> >
>>
>>  o arquivo nao eh instalado pelo pacote...
>>>
>>> vc tem q ir no site www.gdal.org (o mostrado na mensagem de erro) e
>>> instalar a biblioteca do sistema (isso eh independente do R) que vai
>>> estar disponivel la...
>>>
>>> depois de vc instalar a biblioteca GDAL, vc volta ao R e tenta
>>> instalar o pacote rgdal.
>>>
>>> b
>>>
>>> 2012/2/14 Pedro Rafael <[hidden email]<http://user/SendEmail.jtp?type=node&node=4388079&i=1>
>>> >:
>>>  > Eu abri o condigo fonte do pacote e o arquivo que ele reclama não
>>> está
>>> > dentro do pacote....Vou tentar ver como resolver o problema por aqui.
>>> >
>>> > Em 14 de fevereiro de 2012 15:26, beniltoncarvalho [via R-br]
>>> > <[hidden email] <http://user/SendEmail.jtp?type=node&node=4388079&i=2>>
>>> escreveu:
>>> >>
>>> >> a msg de erro descreve nao ter encontrado o GDAL instalado (que ele
>>> >> checa via gdal-config)... dai' sugere:
>>> >>
>>> >> If you have not installed the GDAL libraries, you can
>>> >> download the source from  http://www.gdal.org/
>>> >> If you have installed the GDAL libraries, then make sure that
>>> >> gdal-config is in your path. Try typing gdal-config at a
>>> >> shell prompt and see if it runs. If not, use:
>>> >>  --configure-args='--with-gdal-config=/usr/local/bin/gdal-config'
>>> >> with appropriate values for your installation.
>>> >>
>>> >>
>>> >> b
>>> >>
>>> >> 2012/2/14 Pedro Rafael <[hidden email]>:
>>> >>
>>> >> > Pessoal alguém sabe me informar como corrigir este problema na
>>> >> > instalação do pacote rgdal?
>>> >> >
>>> >> >> install.packages("rgdal")
>>> >> > Installing package(s) into ‘/usr/local/lib/R/site-library’
>>> >> > (as ‘lib’ is unspecified)
>>> >> > tentando a URL
>>> >> > 'http://www.vps.fmvz.usp.br/CRAN/src/contrib/rgdal_0.7-8.tar.gz'
>>> >> > Content type 'application/x-gzip' length 1427851 bytes (1.4 Mb)
>>> >> > URL aberta
>>> >> > ==================================================
>>> >> > downloaded 1.4 Mb
>>> >> >
>>> >> >
>>> >> >
>>> >> >
>>> >> > * installing *source* package ‘rgdal’ ...
>>> >> > ** package ‘rgdal’ successfully unpacked and MD5 sums checked
>>> >> > gdal-config: gdal-config
>>> >> > ./configure: line 2013: gdal-config: command not found
>>> >> > Error: gdal-config not found
>>> >> > The gdal-config script distributed with GDAL could not be found.
>>> >> > If you have not installed the GDAL libraries, you can
>>> >> > download the source from  http://www.gdal.org/
>>> >> > If you have installed the GDAL libraries, then make sure that
>>> >> > gdal-config is in your path. Try typing gdal-config at a
>>> >> > shell prompt and see if it runs. If not, use:
>>> >> >  --configure-args='--with-gdal-config=/usr/local/bin/gdal-config'
>>> >> > with appropriate values for your installation.
>>> >> >
>>> >> >
>>> >> > ERROR: configuration failed for package ‘rgdal’
>>> >> > * removing ‘/usr/local/lib/R/site-library/rgdal’
>>> >> >
>>> >> >
>>> >> > The downloaded packages are in
>>> >> >        ‘/tmp/RtmpcOSraQ/downloaded_packages’
>>> >> > Mensagens de aviso perdidas:
>>> >> > In install.packages("rgdal") :
>>> >> >   installation of package ‘rgdal’ had non-zero exit status
>>> >> >
>>> >> > --
>>> >> > Saudações,
>>> >> > Pedro Rafael Diniz Marinho.
>>> >> > Estatístico - Secretaria de Estado da Saúde - PB.
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>>> > --
>>> > Saudações,
>>> > Pedro Rafael Diniz Marinho.
>>> > Estatístico - Secretaria de Estado da Saúde - PB.
>>> >
>>> >
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>  --
> Saudações,
> Pedro Rafael Diniz Marinho.
> Estatístico - Secretaria de Estado da Saúde - PB.
>
>
>
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-- 
Saudações,
Pedro Rafael Diniz Marinho.
Estatístico - Secretaria de Estado da Saúde - PB.
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